Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADB47767.1PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1 repeat-containing protein. (865 aa)    
Predicted Functional Partners:
ADB47766.1
KEGG: sha:SH0243 hypothetical protein.
      0.838
ADB46786.1
PFAM: Haemagluttinin domain protein; Hep_Hag repeat- containing protein; YadA domain protein; S-layer domain protein; KEGG: pmu:PM0714 Hsf.
  
     0.663
ADB47622.1
KEGG: dvl:Dvul_2938 hypothetical protein.
  
     0.658
ADB48050.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hypothetical protein.
  
     0.643
ADB47624.1
Hypothetical protein; KEGG: pap:PSPA7_6042 methyl-accepting chemotaxis protein.
 
   0.638
ADB46836.1
KEGG: sca:Sca_2326 hypothetical protein.
  
     0.637
ADB48394.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: bbe:BBR47_26850 putative transcriptional regulator.
  
     0.621
ADB47799.1
KEGG: fps:FP0848 hypothetical protein.
  
    0.599
ADB46683.1
KEGG: sto:ST1078 hypothetical protein.
  
     0.584
ADB48152.1
KEGG: cac:CA_P0014 protein tyrosine phosphatase II superfamily protein.
  
   0.576
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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