Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47894.1KEGG: bvu:BVU_2290 hypothetical protein. (91 aa)    
Predicted Functional Partners:
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
       0.537
ADB47831.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: fnu:FN0550 mannose-1-phosphate guanylyl transferase (GDP).
  
     0.484
ADB47200.1
Hypothetical protein; KEGG: cco:CCC13826_0299 spore coat polysaccharide biosynthesis protein SpsC-like protein.
  
     0.460
ADB47768.1
Hypothetical protein; KEGG: cyn:Cyan7425_3973 KWG leptospira repeat protein.
  
     0.436
ADB47255.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: ccu:Ccur_09790 cupin domain-containing protein.
  
     0.431
ADB46574.1
PFAM: Haemagluttinin domain protein; YadA domain protein; KEGG: msu:MS0748 hypothetical protein.
  
     0.414
ADB47957.1
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: eel:EUBELI_01464 Cu2+-exporting ATPase.
   
 
 0.402
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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