STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB47897.1Hypothetical protein; KEGG: dau:Daud_0847 copper amine oxidase domain- containing protein. (384 aa)    
Predicted Functional Partners:
ADB48053.1
PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein.
  
     0.771
ADB47049.1
KEGG: hor:Hore_16410 hypothetical protein.
  
     0.770
ADB48033.1
PFAM: OstA family protein; KEGG: lba:Lebu_2045 OstA family protein.
  
     0.770
ADB46957.1
PFAM: acyltransferase 3; KEGG: aoe:Clos_0058 acyltransferase 3.
  
     0.766
ADB48049.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hor:Hore_17650 outer membrane chaperone Skp (OmpH).
  
     0.764
ADB48013.1
Hypothetical protein.
  
     0.761
ADB48034.1
PFAM: protein of unknown function DUF1239; KEGG: cyh:Cyan8802_4032 protein of unknown function DUF1239.
  
     0.757
ADB47827.1
S-adenosylmethionine decarboxylase related protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
  
     0.752
ADB46872.1
KEGG: sth:STH1468 hypothetical protein.
  
     0.751
ADB46416.1
PFAM: protein of unknown function DUF721; KEGG: cef:CE0005 hypothetical protein.
  
     0.750
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.