Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADB47901.1 | ADB47902.1 | Acfer_1543 | Acfer_1544 | KEGG: ere:EUBREC_0176 hypothetical protein. | PFAM: VanZ family protein; KEGG: cpe:CPE0070 phosphotransbutyrylase. | 0.721 |
ADB47901.1 | ADB47903.1 | Acfer_1543 | Acfer_1545 | KEGG: ere:EUBREC_0176 hypothetical protein. | Hypothetical protein. | 0.518 |
ADB47902.1 | ADB47901.1 | Acfer_1544 | Acfer_1543 | PFAM: VanZ family protein; KEGG: cpe:CPE0070 phosphotransbutyrylase. | KEGG: ere:EUBREC_0176 hypothetical protein. | 0.721 |
ADB47902.1 | ADB47903.1 | Acfer_1544 | Acfer_1545 | PFAM: VanZ family protein; KEGG: cpe:CPE0070 phosphotransbutyrylase. | Hypothetical protein. | 0.558 |
ADB47903.1 | ADB47901.1 | Acfer_1545 | Acfer_1543 | Hypothetical protein. | KEGG: ere:EUBREC_0176 hypothetical protein. | 0.518 |
ADB47903.1 | ADB47902.1 | Acfer_1545 | Acfer_1544 | Hypothetical protein. | PFAM: VanZ family protein; KEGG: cpe:CPE0070 phosphotransbutyrylase. | 0.558 |
ADB47903.1 | ADB47904.1 | Acfer_1545 | Acfer_1546 | Hypothetical protein. | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_2867 LysR family transcriptional regulator. | 0.523 |
ADB47904.1 | ADB47903.1 | Acfer_1546 | Acfer_1545 | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_2867 LysR family transcriptional regulator. | Hypothetical protein. | 0.523 |