Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADB47995.1PFAM: peptidase M48 Ste24p; KEGG: ank:AnaeK_1042 peptidase M48 Ste24p. (373 aa)    
Predicted Functional Partners:
ADB47994.1
TIGRFAM: methyltransferase FkbM family; KEGG: aba:Acid345_2845 methyltransferase FkbM.
 
 
 
 0.820
ADB46758.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cpc:Cpar_1184 TonB-dependent receptor.
  
     0.697
ADB48054.1
PFAM: outer membrane efflux protein; KEGG: dde:Dde_0961 outer membrane protein-like.
  
   
 0.673
ADB48052.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: hor:Hore_17680 surface antigen (D15).
  
   
 0.669
ADB48251.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pmr:PMI3246 vitamin B12/cobalamin outer membrane transporter.
  
     0.602
ADB47053.1
PFAM: Peptidase M23; KEGG: dae:Dtox_3964 peptidase M23.
 
 
   0.597
ADB46791.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: efe:EFER_2240 colicin I receptor.
  
     0.582
ADB48031.1
PFAM: permease YjgP/YjgQ family protein; KEGG: gvi:gvip124 hypothetical protein.
  
     0.562
ADB48053.1
PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein.
  
     0.534
ADB46912.1
PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: gem:GM21_2665 type IV pilus secretin PilQ; Belongs to the bacterial secretin family.
 
     0.529
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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