Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADB48029.1Endonuclease; KEGG: eel:EUBELI_20121 endonuclease. (246 aa)    
Predicted Functional Partners:
ADB48030.1
KEGG: eel:EUBELI_20122 hypothetical protein.
 
     0.954
ADB47813.1
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: dae:Dtox_3303 DNA internalization-related competence protein ComEC/Rec2.
     
 0.495
cinA
TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: dth:DICTH_1766 competence-damage inducible protein; Belongs to the CinA family.
     
 0.436
ADB48031.1
PFAM: permease YjgP/YjgQ family protein; KEGG: gvi:gvip124 hypothetical protein.
       0.435
ADB48032.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dfe:Dfer_4049 ABC transporter related.
       0.435
ADB46572.1
methylated-DNA/protein- cysteinemethyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
  
 0.431
ADB48027.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
       0.428
ADB48028.1
Uncharacterized protein with the myosin-like protein domain; KEGG: dth:DICTH_0671 hypothetical protein.
       0.428
ADB48033.1
PFAM: OstA family protein; KEGG: lba:Lebu_2045 OstA family protein.
       0.427
ADB48034.1
PFAM: protein of unknown function DUF1239; KEGG: cyh:Cyan8802_4032 protein of unknown function DUF1239.
       0.427
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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