Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADB48057.1PFAM: protein of unknown function DUF140; KEGG: cyh:Cyan8802_4107 protein of unknown function DUF140; Belongs to the MlaE permease family. (260 aa)    
Predicted Functional Partners:
ADB48055.1
PFAM: Mammalian cell entry related domain protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.999
ADB48056.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component.
 
 0.999
ADB48054.1
PFAM: outer membrane efflux protein; KEGG: dde:Dde_0961 outer membrane protein-like.
 
     0.844
ADB48052.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: hor:Hore_17680 surface antigen (D15).
 
     0.708
ADB48031.1
PFAM: permease YjgP/YjgQ family protein; KEGG: gvi:gvip124 hypothetical protein.
 
 
 0.674
ADB48058.1
KEGG: hor:Hore_17720 hypothetical protein.
 
     0.649
ADB48032.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dfe:Dfer_4049 ABC transporter related.
 
  
  0.605
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
    0.567
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
     0.532
ADB46728.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: ote:Oter_2347 MotA/TolQ/ExbB proton channel.
  
     0.523
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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