Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48081.1TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA; KEGG: cbf:CLI_0051 sigma-K factor processing regulatory protein BofA. (81 aa)    
Predicted Functional Partners:
ADB48078.1
PFAM: sulfatase; KEGG: emi:Emin_0565 sulfatase.
 
     0.858
ADB48079.1
PFAM: diacylglycerol kinase catalytic region; KEGG: hau:Haur_1562 diacylglycerol kinase catalytic region.
 
     0.788
ADB48080.1
PFAM: GtrA family protein; KEGG: ele:Elen_1247 GtrA family protein.
       0.777
ADB48013.1
Hypothetical protein.
  
     0.743
ADB46416.1
PFAM: protein of unknown function DUF721; KEGG: cef:CE0005 hypothetical protein.
  
     0.707
ADB47232.1
KEGG: sth:STH1851 hypothetical protein.
  
     0.699
ADB48033.1
PFAM: OstA family protein; KEGG: lba:Lebu_2045 OstA family protein.
  
     0.696
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.674
ADB48053.1
PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein.
  
     0.668
ADB48083.1
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.656
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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