Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48113.1KEGG: nth:Nther_2075 hydrolase (HAD superfamily). (402 aa)    
Predicted Functional Partners:
ADB47655.1
PFAM: Type II secretion system F domain; KEGG: dar:Daro_0638 type II secretion system protein.
  
  
 0.795
ADB46914.1
PFAM: type II secretion system protein E; KEGG: dac:Daci_1299 general secretory pathway protein E.
  
  
 0.749
ADB48114.1
PFAM: domain of unknown function DUF1730; KEGG: cdf:CD0563 putative iron-sulfur cluster protein.
       0.727
ADB48115.1
Hypothetical protein; KEGG: rbi:RB2501_15429 putative acylhydrolase.
       0.592
ADB46976.1
PFAM: S23 ribosomal protein; KEGG: tbd:Tbd_0653 hypothetical protein.
  
  
 0.546
ADB47123.1
PFAM: S23 ribosomal protein; KEGG: fjo:Fjoh_0743 S23 ribosomal protein.
  
  
 0.546
ADB47654.1
KEGG: tpd:Teth39_1070 Tfp pilus assembly protein PilE-like protein.
  
  
 0.546
ADB48112.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: fno:Fnod_1064 Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.461
ADB47813.1
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: dae:Dtox_3303 DNA internalization-related competence protein ComEC/Rec2.
   
  
 0.453
ADB48022.1
PFAM: NLP/P60 protein; KEGG: tpd:Teth39_0205 NLP/P60 protein.
  
     0.431
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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