Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48129.1PFAM: Integrase catalytic region; KEGG: gtn:GTNG_3485 transposase. (476 aa)    
Predicted Functional Partners:
ADB48128.1
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sth:STH274 IS21 family transposase.
 
 0.972
ADB47578.1
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bha:BH3144 primosomal protein DnaI.
 
 
 0.490
ADB48126.1
KEGG: dae:Dtox_0153 hypothetical protein.
       0.437
ADB48127.1
PFAM: protein of unknown function DUF637 hemagglutinin putative; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein.
       0.437
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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