Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48132.1PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: rme:Rmet_5340 TonB box-like protein. (562 aa)    
Predicted Functional Partners:
ADB48131.1
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: cvi:CV_2872 hemagglutinin.
 
 
 0.936
ADB48130.1
TIGRFAM: adhesin HecA family; PFAM: protein of unknown function DUF637 hemagglutinin putative; Haemagluttinin repeat-containing protein; KEGG: plu:plu1149 hypothetical protein.
 
 
 0.922
ADB48123.1
PFAM: protein of unknown function DUF637 hemagglutinin putative; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein.
 
 
 0.800
ADB48125.1
Hypothetical protein; KEGG: spe:Spro_4077 filamentous haemagglutinin outer membrane protein.
 
 
 0.800
ADB48127.1
PFAM: protein of unknown function DUF637 hemagglutinin putative; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein.
 
 
 0.800
ADB46608.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; surface antigen (D15); KEGG: gsu:GSU1153 OMP85 family outer membrane protein.
  
  
 
0.575
ADB47098.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: avn:Avin_37880 hypothetical protein.
     
 
0.540
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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