STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48220.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pmu:PM0932 hypothetical protein. (373 aa)    
Predicted Functional Partners:
ADB48219.1
PFAM: NUDIX hydrolase; KEGG: hypothetical protein.
  
    0.781
ADB48218.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.778
ADB46475.1
TIGRFAM: peptidase T-like protein; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: sth:STH1689 peptidase.
 
     0.534
ADB48222.1
PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: bld:BLi00501 KipI.
  
    0.526
ADB48221.1
KEGG: cbe:Cbei_2756 UreA amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2.
       0.523
ADB48223.1
KEGG: tau:Tola_1857 hypothetical protein.
       0.501
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.