Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ADB48229.1Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: eel:EUBELI_00660 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator. (311 aa)    
Predicted Functional Partners:
ADB48230.1
PFAM: protein of unknown function DUF214; KEGG: dra:DR_B0050 hypothetical protein.
       0.592
ADB48231.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gau:GAU_2113 putative ABC transporter ATP- binding protein.
       0.592
ADB47297.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3865 LysR family transcriptional regulator.
  
     0.551
ADB48369.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator.
  
     0.551
ADB48377.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_2867 LysR family transcriptional regulator.
  
     0.526
ADB46821.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cpy:Cphy_2156 LysR family transcriptional regulator.
  
     0.471
ADB48232.1
KEGG: rru:Rru_A1290 hypothetical protein.
       0.452
ADB48233.1
PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; KEGG: kra:Krad_0180 alkaline phosphatase; Belongs to the alkaline phosphatase family.
       0.452
ADB46581.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: aoe:Clos_2342 LysR family transcriptional regulator.
  
     0.433
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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