Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48242.1PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ere:EUBREC_3345 lysine decarboxylase. (485 aa)    
Predicted Functional Partners:
ADB48240.1
TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cpy:Cphy_3053 agmatinase; Belongs to the arginase family.
 
 
 0.991
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.
 
 0.982
ADB48239.1
PFAM: Saccharopine dehydrogenase; KEGG: eel:EUBELI_01424 saccharopine dehydrogenase (NAD+, L-lysine forming).
 
  
  0.953
ADB46624.1
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ppg:PputGB1_3103 agmatinase; Belongs to the arginase family.
 
 
 0.928
ADB48351.1
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sat:SYN_01147 arginase; Belongs to the arginase family.
 
 
 0.926
ADB47029.1
PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: fnu:FN0501 arginase.
  
  
 
0.914
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: pth:PTH_0517 argininosuccinate lyase.
     
 0.811
ADB48238.1
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bha:BH3958 carboxynorspermidine decarboxylase.
 
   
 0.573
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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