Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcpPyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. (214 aa)    
Predicted Functional Partners:
ADB46980.1
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mmy:MSC_1062 AAA ATPase family protein.
    
   0.810
ADB47515.1
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: shi:Shel_12070 permease, glycerol uptake facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.807
ADB46602.1
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.790
ADB46721.1
KEGG: ele:Elen_3041 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein.
    
   0.621
ADB47424.1
KEGG: cce:Ccel_2968 hypothetical protein.
    
   0.621
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
   0.620
ADB47429.1
PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: mei:Msip34_0959 heat shock protein DnaJ domain protein.
   
   0.620
ADB46731.1
KEGG: bay:RBAM_036150 hypothetical protein.
   
   0.612
ADB47624.1
Hypothetical protein; KEGG: pap:PSPA7_6042 methyl-accepting chemotaxis protein.
   
   0.612
ADB48309.1
PFAM: Capsule synthesis protein, CapA; KEGG: cdf:CD0173 putative lipoprotein.
       0.495
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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