Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48311.1KEGG: ypg:YpAngola_A0185 hypothetical protein. (423 aa)    
Predicted Functional Partners:
ADB48384.1
PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: apl:APL_0104 autotransporter adhesin.
  
     0.752
ADB46444.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Gp5 domain protein; KEGG: sep:SE2249 streptococcal hemagglutinin protein.
  
     0.748
ADB47363.1
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_3990 GDSL family lipase.
  
     0.717
ADB47622.1
KEGG: dvl:Dvul_2938 hypothetical protein.
  
     0.716
ADB46731.1
KEGG: bay:RBAM_036150 hypothetical protein.
  
     0.707
ADB46786.1
PFAM: Haemagluttinin domain protein; Hep_Hag repeat- containing protein; YadA domain protein; S-layer domain protein; KEGG: pmu:PM0714 Hsf.
  
     0.699
ADB47516.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: pmu:PM0714 Hsf.
  
     0.692
ADB47218.1
KEGG: fma:FMG_1388 hypothetical protein.
  
     0.681
ADB48115.1
Hypothetical protein; KEGG: rbi:RB2501_15429 putative acylhydrolase.
  
     0.677
ADB47624.1
Hypothetical protein; KEGG: pap:PSPA7_6042 methyl-accepting chemotaxis protein.
  
     0.659
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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