Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADB48316.1KEGG: cma:Cmaq_1396 hypothetical protein. (296 aa)    
Predicted Functional Partners:
ADB48315.1
PFAM: Dicarboxylate carrier MatC domain protein; KEGG: mmw:Mmwyl1_0970 dicarboxylate carrier MatC domain-containing protein.
 
     0.895
ADB48317.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator.
 
    0.645
ADB48350.1
KEGG: bcl:ABC0392 hypothetical protein.
  
     0.628
ADB48376.1
PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpc:RPC_2726 dimethylmenaquinone methyltransferase.
 
     0.498
ADB47024.1
PFAM: Dicarboxylate carrier MatC domain protein; Citrate transporter; KEGG: aoe:Clos_0814 dicarboxylate carrier MatC domain-containing protein.
 
     0.451
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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