STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48319.1PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: efe:EFER_3668 putative isocitrate dehydrogenase. (393 aa)    
Predicted Functional Partners:
ADB47001.1
KEGG: tte:TTE0387 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.950
ADB46483.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP2322 2-ketoglutarate oxidoreductase subunit delta.
     
  0.900
ADB46484.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: nth:Nther_1482 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
     
  0.900
ADB46485.1
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tte:TTE1341 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
   
 
  0.900
ADB46486.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: mka:MK0730 2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
     
  0.900
ADB46586.1
PFAM: Aldehyde Dehydrogenase; KEGG: sak:SAK_1211 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
 0.861
ADB47312.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 0.843
ADB48112.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: fno:Fnod_1064 Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.824
ADB46885.1
PFAM: aminotransferase class I and II; KEGG: amt:Amet_2618 aspartate aminotransferase.
   
 0.819
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: pth:PTH_0517 argininosuccinate lyase.
  
 
 0.819
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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