STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48331.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator. (323 aa)    
Predicted Functional Partners:
ADB46821.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cpy:Cphy_2156 LysR family transcriptional regulator.
  
     0.773
ADB46581.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: aoe:Clos_2342 LysR family transcriptional regulator.
  
     0.770
ADB46779.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3865 LysR family transcriptional regulator.
  
     0.768
ADB47297.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3865 LysR family transcriptional regulator.
  
     0.768
ADB47400.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: cac:CAC0768 LysR family transcriptional regulator.
  
     0.759
ADB48329.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Extracellular solute-binding protein, family 7, bacteria; KEGG: ere:EUBREC_2838 hypothetical protein.
  
    0.528
ADB48330.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: asu:Asuc_0367 tripartite ATP-independent periplasmic transporter DctQ.
       0.526
ADB48328.1
PFAM: amidohydrolase; KEGG: sei:SPC_4564 dihydroorotase.
       0.421
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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