Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48337.1KEGG: gka:GK1970 hypothetical protein. (422 aa)    
Predicted Functional Partners:
ADB48338.1
TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: cce:Ccel_2593 endoribonuclease L-PSP.
       0.461
ADB48339.1
N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase domain protein; amidohydrolase; KEGG: drm:Dred_0263 N-acyl-D-amino-acid deacylase.
       0.461
ADB48340.1
PFAM: Na+/solute symporter; KEGG: dde:Dde_1268 putative sodium:solute symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.442
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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