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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48349.1PFAM: extracellular solute-binding protein family 1; KEGG: sth:STH1146 ABC transporter substrate-binding protein. (345 aa)    
Predicted Functional Partners:
ADB48347.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1455 AfuB.
 
 
 0.989
ADB46620.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1147 ABC transporter permease protein.
 
 
 0.974
ADB48346.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: asu:Asuc_1715 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.963
ADB48348.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pmu:PM1456 hypothetical protein.
 
 
 0.962
ADB46619.1
PFAM: extracellular solute-binding protein family 1; KEGG: sth:STH1146 ABC transporter substrate-binding protein.
  
  
 
0.912
ADB46621.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tga:TGAM_1014 ABC-type transport system, ATPase component, putative Fe3+ transporter (FbpC/AfuC); Belongs to the ABC transporter superfamily.
 
 
 0.906
ADB46557.1
TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: gka:GK1526 hypothetical protein.
 
     0.464
ADB46726.1
PFAM: periplasmic binding protein; KEGG: cce:Ccel_3204 periplasmic binding protein.
 
  
 0.460
ADB48350.1
KEGG: bcl:ABC0392 hypothetical protein.
       0.414
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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