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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48350.1KEGG: bcl:ABC0392 hypothetical protein. (157 aa)    
Predicted Functional Partners:
ADB48394.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: bbe:BBR47_26850 putative transcriptional regulator.
  
 
   0.757
ADB46786.1
PFAM: Haemagluttinin domain protein; Hep_Hag repeat- containing protein; YadA domain protein; S-layer domain protein; KEGG: pmu:PM0714 Hsf.
  
     0.756
ADB46651.1
KEGG: bbe:BBR47_47820 hypothetical protein.
  
     0.745
ADB46684.1
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: shi:Shel_22480 hypothetical protein.
  
     0.742
ADB48018.1
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: hypothetical protein.
  
     0.742
ADB46683.1
KEGG: sto:ST1078 hypothetical protein.
 
    0.738
ADB47622.1
KEGG: dvl:Dvul_2938 hypothetical protein.
  
     0.738
ADB48050.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hypothetical protein.
  
     0.733
ADB46836.1
KEGG: sca:Sca_2326 hypothetical protein.
  
     0.731
ADB47822.1
Hypothetical protein; KEGG: afo:Afer_0600 membrane-flanked domain protein.
  
     0.726
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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