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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48352.1PFAM: natural resistance-associated macrophage protein; KEGG: oih:OB0737 hypothetical protein. (409 aa)    
Predicted Functional Partners:
ADB48351.1
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sat:SYN_01147 arginase; Belongs to the arginase family.
  
    0.637
ADB48353.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: aau:AAur_0478 IclR family transcriptional regulator.
  
    0.546
ADB48370.1
KEGG: apa:APP7_0185 predicted Mn2+ and Fe2+ transporters of the NRAMP family.
  
     0.514
ADB48354.1
Amidase, hydantoinase/carbamoylase family; KEGG: oih:OB3444 allantoate amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein.
       0.499
ADB48350.1
KEGG: bcl:ABC0392 hypothetical protein.
       0.470
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.