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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48357.1PFAM: Creatininase; KEGG: tte:TTE1020 uncharacterized protein, putative amidase. (243 aa)    
Predicted Functional Partners:
ADB48355.1
Amidohydrolase; KEGG: amt:Amet_4336 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
       0.655
ADB48356.1
PFAM: sodium/glutamate symporter; KEGG: cgt:cgR_2677 hypothetical protein.
       0.655
ADB48358.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: cac:CAC3409 LysR family transcriptional regulator.
 
     0.592
ADB47159.1
PFAM: glycosyl transferase family 2; KEGG: dhd:Dhaf_0177 glycosyl transferase family 2.
  
  
 0.486
ADB47583.1
PFAM: glycosyl transferase family 2; KEGG: bbe:BBR47_20870 hypothetical protein.
  
  
 0.486
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.