Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB48359.1Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: amt:Amet_0553 GntR family transcriptional regulator. (209 aa)    
Predicted Functional Partners:
ADB47709.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: set:SEN3190 LysR-family transcriptional regulator.
  
     0.773
ADB47473.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cce:Ccel_1263 GntR domain protein.
  
  
 0.693
ADB48360.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: csa:Csal_2976 TRAP dicarboxylate transporter, DctP subunit.
       0.521
ADB48363.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: csc:Csac_2739 mandelate racemase/muconate lactonizing protein.
 
     0.497
ADB48362.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pat:Patl_0772 TRAP dicarboxylate transporter, DctM subunit.
  
    0.409
ADB48361.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: csa:Csal_1073 tripartite ATP-independent periplasmic transporter DctQ.
       0.402
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.