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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48366.1PFAM: protein of unknown function DUF112 transmembrane; KEGG: efe:EFER_0273 hypothetical protein. (492 aa)    
Predicted Functional Partners:
ADB48368.1
PFAM: conserved hypothetical protein; KEGG: asu:Asuc_1849 hypothetical protein.
 
  
 0.927
ADB47250.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: fnu:FN2105 integral membrane protein.
  
  
 
0.909
ADB47471.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: oih:OB2838 hypothetical protein.
  
  
 
0.903
ADB47470.1
PFAM: conserved hypothetical protein; KEGG: oih:OB2837 hypothetical protein.
  
 0.860
ADB48367.1
KEGG: efe:EFER_0274 hypothetical protein; putative membrane protein.
  
  
 0.860
ADB47252.1
PFAM: conserved hypothetical protein; KEGG: fnu:FN2103 RecA protein.
 
  
 0.849
ADB47472.1
KEGG: oih:OB2839 hypothetical protein.
 
  
 0.708
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.