Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48372.1KEGG: cma:Cmaq_1396 hypothetical protein. (279 aa)    
Predicted Functional Partners:
ADB48373.1
PFAM: Citrate transporter; KEGG: dde:Dde_1252 cation transporter.
 
     0.849
ADB48376.1
PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpc:RPC_2726 dimethylmenaquinone methyltransferase.
 
     0.632
ADB48378.1
PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; NADP oxidoreductase coenzyme F420- dependent; KEGG: bcl:ABC3757 hypothetical protein.
 
     0.550
ADB47162.1
PFAM: Amino acid transporter transmembrane; KEGG: pag:PLES_12131 putative aromatic amino acid transporter.
  
     0.475
ADB48374.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rpc:RPC_2727 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
       0.403
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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