Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48387.1KEGG: bfs:BF1066 putative ATP/GTP-binding protein. (439 aa)    
Predicted Functional Partners:
ADB48386.1
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: amt:Amet_0676 gamma-glutamyltransferase.
       0.727
ADB48385.1
TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: fma:FMG_1585 hypothetical protein.
 
     0.632
ADB46900.1
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: dhd:Dhaf_4703 putative transcriptional regulator.
  
     0.621
ADB48404.1
PFAM: ATPase; DUF234 DEXX-box ATPase; KEGG: kol:Kole_0490 ATPase.
  
     0.584
ADB48388.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.519
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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