Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48393.1KEGG: hmo:HM1_0776 hypothetical protein. (189 aa)    
Predicted Functional Partners:
ADB48390.1
PFAM: cobalt transport protein; KEGG: pth:PTH_1659 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.972
ADB48392.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tsi:TSIB_1505 putative ABC transporter ATP- binding protein.
     0.915
ADB48391.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A3550 cobalt transport ATP-binding protein.
   0.862
ADB46659.1
KEGG: ace:Acel_0811 hypothetical protein.
  
    0.732
ADB48049.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hor:Hore_17650 outer membrane chaperone Skp (OmpH).
  
     0.732
ADB48053.1
PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein.
  
     0.699
ADB48033.1
PFAM: OstA family protein; KEGG: lba:Lebu_2045 OstA family protein.
  
     0.697
ADB47049.1
KEGG: hor:Hore_16410 hypothetical protein.
  
     0.689
ADB47897.1
Hypothetical protein; KEGG: dau:Daud_0847 copper amine oxidase domain- containing protein.
  
     0.684
ADB48291.1
KEGG: hmo:HM1_0011 hypothetical protein.
  
     0.675
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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