Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB48428.1TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bur:Bcep18194_C6529 peptidase M20D, amidohydrolase. (470 aa)    
Predicted Functional Partners:
ADB48429.1
PFAM: GTP-binding protein HSR1-related; KEGG: similar to immunity-related GTPase family, f1.
       0.592
ADB48430.1
PFAM: GTP-binding protein HSR1-related; KEGG: similar to LOC616722 protein.
       0.592
ADB48431.1
KEGG: cpy:Cphy_3413 L-asparaginase, type I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase.
       0.576
ADB48427.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: eel:EUBELI_20019 hypothetical protein.
       0.559
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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