Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADI31230.1ABC transporter related protein; KEGG: pca:Pcar_1575 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase. (314 aa)    
Predicted Functional Partners:
ADI31826.1
Hypothetical protein; KEGG: reh:PHG248 putative transmembrane protein.
  
 
 0.608
ADI31584.1
PFAM: ABC-2 type transporter; KEGG: pca:Pcar_1576 hypothetical protein.
 
  
 0.525
ADI31523.1
MATE efflux family protein; KEGG: sun:SUN_0162 sodium-driven multidrug efflux pump protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE.
  
  
 0.418
ADI32113.1
KEGG: pha:PSHAa2154 efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein.
  
  
 0.418
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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