Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADI31247.1PFAM: Radical SAM domain protein; KEGG: nam:NAMH_0848 radical SAM. (348 aa)    
Predicted Functional Partners:
ADI32731.1
PFAM: protein of unknown function DUF52; KEGG: gme:Gmet_1957 hypothetical protein; Belongs to the MEMO1 family.
     0.730
ADI32241.1
PFAM: AMMECR1 domain protein; KEGG: dal:Dalk_3956 AMMECR1 domain protein.
 
     0.723
ADI31887.1
PFAM: iron-containing alcohol dehydrogenase; KEGG: dma:DMR_08290 alcohol dehydrogenase.
  
  
 0.490
ADI31248.1
PFAM: Protein of unknown function DUF2204.
       0.444
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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