STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI31435.1KEGG: noc:Noc_2211 transposase IS605; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB. (434 aa)    
Predicted Functional Partners:
ADI31365.1
KEGG: pna:Pnap_3173 transposase, IS605 OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family.
  
     0.631
ADI32308.1
KEGG: xfm:Xfasm12_1564 hypothetical protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR.
 
  
 0.563
ADI32376.1
SMART: AAA ATPase; KEGG: dps:DP1919 hypothetical protein.
  
     0.548
ADI32133.1
PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: similar to oligonucleotide/oligosaccharide-binding fold containing 2B.
  
     0.537
ADI32138.1
SMART: von Willebrand factor type A; KEGG: ade:Adeh_3265 VWA containing CoxE-like.
  
     0.469
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.