STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI31461.1PFAM: TatD-related deoxyribonuclease. (282 aa)    
Predicted Functional Partners:
ADI31462.1
KEGG: hypothetical protein.
       0.571
ADI32453.1
PFAM: NMD3 family protein.
 
     0.553
ADI31371.1
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein.
  
     0.477
ADI32233.1
Serine protease-like protein; KEGG: hypothetical protein.
  
     0.466
ADI32118.1
PFAM: ATP dependent DNA ligase; KEGG: noc:Noc_1413 ATP-dependent DNA ligase.
  
   
 0.458
ADI31366.1
KEGG: dol:Dole_2980 signal transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.
  
     0.456
ADI31463.1
KEGG: mxa:MXAN_5915 hypothetical protein.
       0.451
ADI31360.1
KEGG: wpi:WPa_0101 orotidine 5`-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase.
  
     0.433
ADI31979.1
Hypothetical protein.
  
     0.428
ADI31739.1
Radical SAM domain protein; KEGG: rfe:RF_1278 tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
     0.426
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.