STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI31477.1PFAM: bifunctional deaminase-reductase domain protein; KEGG: dps:DP2785 riboflavin biosynthesis protein (RibD). (225 aa)    
Predicted Functional Partners:
ADI31446.1
PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: hypothetical protein.
 
 
 0.930
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.911
ADI31479.1
PFAM: Quinolinate phosphoribosyl transferase; KEGG: ilo:IL0103 nicotinate phosphoribosyltransferase.
     
 0.670
ADI31476.1
PFAM: heat shock protein Hsp20; CS; KEGG: gur:Gura_2833 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
   
   0.597
ADI31478.1
PFAM: protein of unknown function UPF0047; KEGG: dol:Dole_0570 hypothetical protein.
       0.587
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.527
ADI31799.1
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; RimK domain protein ATP-grasp; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: bba:Bd3861 pyruvate carboxylase.
   
   0.521
ADI31475.1
KEGG: dal:Dalk_3260 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase.
       0.498
prf1
eRF1 domain 2 protein; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
   
   0.491
ADI31622.1
KEGG: mxa:MXAN_5045 serine/threonine kinase family protein; PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; Pyrrolo-quinoline quinone; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; tyrosine protein kinase; Pyrrolo-quinoline quinone beta-propeller repeat; WD-40 repeat protein.
   
 
 0.488
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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