STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI31490.1PFAM: Thiamine biosynthesis protein-like; Queuosine synthesis-like; KEGG: bpn:BPEN_246 thiamine biosynthesis protein ThiI. (375 aa)    
Predicted Functional Partners:
ADI31489.1
PFAM: t-RNA-binding domain protein; KEGG: nam:NAMH_1243 methionyl-tRNA synthetase.
  
  
 0.692
ADI32456.1
TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; KEGG: SORBIDRAFT_06g017040; hypothetical protein; SMART: Elongator protein 3/MiaB/NifB.
  
  
 0.560
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.548
ADI31215.1
KEGG: similar to predicted protein; PFAM: Fmu (Sun) domain protein; PUA domain containing protein; SMART: PUA domain containing protein.
  
    0.545
ADI31514.1
PFAM: Fmu (Sun) domain protein; KEGG: geo:Geob_1091 sun protein.
  
    0.545
ADI31556.1
PFAM: Fmu (Sun) domain protein; KEGG: dar:Daro_3159 Fmu (Sun)/nucleolar NOL1/Nop2p.
  
    0.545
ADI31689.1
PFAM: Fmu (Sun) domain protein; KEGG: net:Neut_2280 Fmu (Sun) domain-containing protein.
  
    0.545
ADI32122.1
PFAM: Fmu (Sun) domain protein; KEGG: hypothetical protein.
  
    0.545
pus10
THUMP domain protein; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs.
     
 0.485
ADI31883.1
KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; Phosphomethylpyrimidine kinase.
     
 0.484
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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