Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADI31740.1 | ADI31765.1 | Shell_0615 | Shell_0641 | PFAM: Transcription regulator, AsnC-type-like; KEGG: pfl:PFL_5669 AsnC family transcriptional regulator. | KEGG: bpt:Bpet0026 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type. | 0.494 |
ADI31761.1 | ADI31762.1 | Shell_0637 | Shell_0638 | Hypothetical protein. | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.828 |
ADI31761.1 | ADI31763.1 | Shell_0637 | Shell_0639 | Hypothetical protein. | PFAM: protein of unknown function DUF1393. | 0.855 |
ADI31761.1 | ADI31764.1 | Shell_0637 | Shell_0640 | Hypothetical protein. | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | 0.530 |
ADI31761.1 | ADI31765.1 | Shell_0637 | Shell_0641 | Hypothetical protein. | KEGG: bpt:Bpet0026 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type. | 0.500 |
ADI31762.1 | ADI31761.1 | Shell_0638 | Shell_0637 | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | Hypothetical protein. | 0.828 |
ADI31762.1 | ADI31763.1 | Shell_0638 | Shell_0639 | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | PFAM: protein of unknown function DUF1393. | 0.904 |
ADI31762.1 | ADI31764.1 | Shell_0638 | Shell_0640 | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | 0.510 |
ADI31762.1 | ADI31765.1 | Shell_0638 | Shell_0641 | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: bpt:Bpet0026 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type. | 0.481 |
ADI31762.1 | ADI31766.1 | Shell_0638 | Shell_0642 | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | KEGG: reh:H16_B0618 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. | 0.514 |
ADI31763.1 | ADI31761.1 | Shell_0639 | Shell_0637 | PFAM: protein of unknown function DUF1393. | Hypothetical protein. | 0.855 |
ADI31763.1 | ADI31762.1 | Shell_0639 | Shell_0638 | PFAM: protein of unknown function DUF1393. | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.904 |
ADI31763.1 | ADI31764.1 | Shell_0639 | Shell_0640 | PFAM: protein of unknown function DUF1393. | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | 0.538 |
ADI31763.1 | ADI31765.1 | Shell_0639 | Shell_0641 | PFAM: protein of unknown function DUF1393. | KEGG: bpt:Bpet0026 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type. | 0.507 |
ADI31763.1 | ADI31766.1 | Shell_0639 | Shell_0642 | PFAM: protein of unknown function DUF1393. | KEGG: reh:H16_B0618 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. | 0.408 |
ADI31764.1 | ADI31761.1 | Shell_0640 | Shell_0637 | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | Hypothetical protein. | 0.530 |
ADI31764.1 | ADI31762.1 | Shell_0640 | Shell_0638 | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | KEGG: dal:Dalk_4065 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.510 |
ADI31764.1 | ADI31763.1 | Shell_0640 | Shell_0639 | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | PFAM: protein of unknown function DUF1393. | 0.538 |
ADI31764.1 | ADI31765.1 | Shell_0640 | Shell_0641 | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | KEGG: bpt:Bpet0026 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type. | 0.808 |
ADI31764.1 | ADI31766.1 | Shell_0640 | Shell_0642 | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3862 threonine synthase. | KEGG: reh:H16_B0618 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. | 0.714 |
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