STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI31787.1Metal dependent phosphohydrolase; KEGG: HD domain containing protein; K06950; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region. (205 aa)    
Predicted Functional Partners:
ADI31788.1
KEGG: sfu:Sfum_3496 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase.
       0.773
ADI31789.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4800 binding-protein-dependent transport systems inner membrane component.
       0.701
ADI31786.1
Band 7 protein; KEGG: gsu:GSU2430 SPFH domain-containing protein/band 7 family protein; PFAM: band 7 protein; SMART: band 7 protein.
     
 0.583
ADI31785.1
PFAM: protein of unknown function DUF107; KEGG: gbm:Gbem_1213 protein of unknown function DUF107.
       0.556
flpA
Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.
   
 
 0.513
rps15
PFAM: Ribosomal S13S15 domain protein; ribosomal protein S15; KEGG: Os08g0117300; hypothetical protein; K02953 small subunit ribosomal protein S13e.
  
  
 0.457
ADI31790.1
PFAM: extracellular solute-binding protein family 1; KEGG: bpt:Bpet3537 putative regulatory lipoprotein.
       0.454
ADI31746.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: abc:ACICU_01259 HAD superfamily hydrolase.
 
     0.400
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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