STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI31847.1PFAM: transcriptional regulator TrmB; KEGG: dma:DMR_12570 hypothetical protein. (349 aa)    
Predicted Functional Partners:
ADI31846.1
PFAM: glycosyl transferase group 1; KEGG: sat:SYN_02626 lipopolysaccharide N-acetylglucosaminyltransferase.
     
 0.565
ADI31956.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azo:azo2931 hypothetical protein.
   
    0.527
ADI32496.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dds:Ddes_1666 4Fe-4S ferredoxin iron-sulfur binding domain protein.
   
    0.527
ADI31795.1
KEGG: ypb:YPTS_3513 type II secretion system protein E; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; AAA ATPase.
  
     0.493
ADI31845.1
PFAM: Aldehyde Dehydrogenase; KEGG: geo:Geob_3547 aldehyde dehydrogenase.
  
    0.436
spt5
NusG antitermination factor; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
  
     0.420
ADI31791.1
PFAM: Protein of unknown function DUF2223; KEGG: hypothetical protein.
 
   
 0.413
ADI31172.1
PFAM: Protein of unknown function DUF655.
  
     0.410
ef1b
Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
  
     0.408
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.