Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADI31899.1PFAM: PilT protein domain protein; KEGG: vap:Vapar_2763 hypothetical protein. (142 aa)    
Predicted Functional Partners:
ADI31900.1
Hypothetical protein.
       0.796
ADI31969.1
PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_0658 DNA polymerase beta subunit.
  
     0.523
ADI31469.1
Metallopeptidase-like protein.
  
     0.520
ADI32684.1
PFAM: DNA polymerase B region; DNA polymerase B exonuclease; KEGG: hypothetical protein; K02320 DNA polymerase alpha subunit A; SMART: DNA-directed DNA polymerase B.
 
     0.489
ADI32048.1
Rossmann fold nucleotide-binding protein-like protein; KEGG: pca:Pcar_2033 hypothetical protein.
  
     0.463
ADI31242.1
PFAM: DNA polymerase beta domain protein region; KEGG: ara:Arad_15018 nucleotidyltransferase protein.
  
     0.421
ADI31713.1
PFAM: PilT protein domain protein; KEGG: rfe:RF_0095 toxin of toxin-antitoxin system.
 
  
 0.404
ADI31309.1
KEGG: dol:Dole_0745 CRISPR-associated protein APE2256 family; TIGRFAM: CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256.
 
     0.403
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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