Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADI32224.1Radical SAM domain protein; KEGG: sat:SYN_00381 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (342 aa)    
Predicted Functional Partners:
ADI32225.1
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_6076 metallophosphoesterase.
 
   
 0.811
ADI32223.1
Hypothetical protein; KEGG: afw:Anae109_1609 putative RNA methylase.
       0.796
ADI32218.1
Solute binding protein-like protein; KEGG: hypothetical protein.
 
   
 0.654
tbp
TATA-box binding family protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
      
 0.596
ADI32230.1
Membrane protein-like protein.
      
 0.596
ADI32234.1
KEGG: sat:SYN_02178 uracil DNA glycosylase superfamily protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily.
      
 0.596
ADI32668.1
SMART: DNA-directed DNA polymerase B; TIGRFAM: DNA polymerase Pol2; KEGG: pold1; polymerase (DNA directed), delta 1, catalytic subunit 125kDa; K02327 DNA polymerase delta subunit 1; PFAM: DNA polymerase B region; DNA polymerase B exonuclease.
   
    0.477
ADI32221.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: scl:sce3461 oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase.
       0.467
ADI32222.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sat:SYN_02171 oligopeptide transport ATP-binding protein; SMART: AAA ATPase.
       0.467
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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