STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI32272.1PFAM: protein of unknown function DUF75. (268 aa)    
Predicted Functional Partners:
ADI32271.1
KEGG: mca:MCA1730 HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
       0.829
dnaG
TOPRIM domain protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.
 
     0.555
ADI32636.1
Protein of unknown function DUF127; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.
 
     0.520
psmA
Proteasome endopeptidase complex, alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
    
 
 0.519
ADI31311.1
PFAM: Protein of unknown function UPF0147; Belongs to the UPF0147 family.
  
     0.515
ADI32319.1
PFAM: Protein of unknown function DUF54; Belongs to the UPF0201 family.
  
     0.497
ADI32273.1
AAA ATPase central domain protein; KEGG: hypothetical protein; K12196 vacuolar protein-sorting-associated protein 4; PFAM: AAA ATPase central domain protein; MIT domain protein; SMART: AAA ATPase; MIT domain protein.
       0.437
ADI32690.1
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: sun:SUN_1978 phosphoesterase.
  
     0.437
nac
alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.
  
     0.428
ADI31172.1
PFAM: Protein of unknown function DUF655.
  
     0.405
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.