STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI32302.1Putative transcriptional regulator, AsnC family; KEGG: hypothetical protein; K03025 DNA-directed RNA polymerase III subunit C34. (140 aa)    
Predicted Functional Partners:
ADI32303.1
Zinc finger TFIIB-type domain protein; KEGG: similar to Transcription initiation factor IIB (General transcription factor TFIIB); K03124 transcription initiation factor TFIIB; PFAM: Zinc finger TFIIB-type domain protein; Transcription factor TFIIB cyclin-related; SMART: Cyclin domain protein.
     
 0.565
ADI32304.1
Hypothetical protein.
       0.563
ADI31938.1
PFAM: SNARE associated Golgi protein; KEGG: ftn:FTN_1187 hypothetical protein.
  
     0.464
rpl13e
Rpl13; K02873 large subunit ribosomal protein L13e; KEGG: rpl13; ribosomal protein L13; K02873 large subunit ribosomal protein L13e; Belongs to the eukaryotic ribosomal protein eL13 family.
  
   
 0.435
ADI32038.1
Transcriptional regulator protein-like protein.
 
     0.435
ADI32323.1
KEGG: nis:NIS_1524 hypothetical protein.
 
     0.432
ADI32662.1
PFAM: Protein of unknown function DUF1512.
  
     0.431
srp19
Ribonucleoprotein complex SRP, Srp19 component; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.
       0.427
ADI32264.1
PFAM: protein of unknown function DUF343.
  
     0.421
ADI32631.1
Phosphate uptake regulator, PhoU; PFAM: PhoU family protein; SpoVT/AbrB domain protein; KEGG: bba:Bd2221 Na/Pi-cotransporter family protein.
  
  
 0.409
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.