STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI32363.1PFAM: protein of unknown function DUF120; KEGG: geo:Geob_0130 HAD-superfamily hydrolase, subfamily IA, variant 3. (130 aa)    
Predicted Functional Partners:
ADI31742.1
KEGG: hypothetical protein; TIGRFAM: cytidyltransferase-related domain protein; PFAM: Protein of unknown function DUF357; cytidylyltransferase.
  
  
 0.936
ADI31447.1
TIGRFAM: riboflavin synthase; KEGG: bba:Bd3037 riboflavin synthase beta chain; PFAM: 67-dimethyl-8-ribityllumazine synthase.
 
  
  0.935
ADI32364.1
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: gsu:GSU0910 aldehyde:ferredoxin oxidoreductase, tungsten-containing; SMART: Aldehyde ferredoxin oxidoreductase.
       0.834
ADI32362.1
RecA-superfamily ATPase implicated in signal transduction-like protein; KEGG: lpp:lpp1116 circadian clock protein KaiC.
 
     0.589
ADI31587.1
Protein of unknown function DUF650; Involved in DNA damage repair; Belongs to the Nre family.
  
     0.552
ADI32640.1
PFAM: PUA domain containing protein; SMART: PUA domain containing protein.
  
     0.536
ADI31393.1
PFAM: PhoU family protein; TrkA-C domain protein.
  
     0.522
gatE
aspartyl-tRNA(Asn) amidotransferase, B subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
 
     0.496
nac
alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.
  
     0.477
dnaG
TOPRIM domain protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.
 
     0.463
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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