Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADI31435.1 | ADI32138.1 | Shell_0302 | Shell_1034 | KEGG: noc:Noc_2211 transposase IS605; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB. | SMART: von Willebrand factor type A; KEGG: ade:Adeh_3265 VWA containing CoxE-like. | 0.469 |
ADI31435.1 | ADI32376.1 | Shell_0302 | Shell_1281 | KEGG: noc:Noc_2211 transposase IS605; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB. | SMART: AAA ATPase; KEGG: dps:DP1919 hypothetical protein. | 0.548 |
ADI31447.1 | ADI32138.1 | Shell_0314 | Shell_1034 | TIGRFAM: riboflavin synthase; KEGG: bba:Bd3037 riboflavin synthase beta chain; PFAM: 67-dimethyl-8-ribityllumazine synthase. | SMART: von Willebrand factor type A; KEGG: ade:Adeh_3265 VWA containing CoxE-like. | 0.506 |
ADI31447.1 | ADI32376.1 | Shell_0314 | Shell_1281 | TIGRFAM: riboflavin synthase; KEGG: bba:Bd3037 riboflavin synthase beta chain; PFAM: 67-dimethyl-8-ribityllumazine synthase. | SMART: AAA ATPase; KEGG: dps:DP1919 hypothetical protein. | 0.436 |
ADI31447.1 | gch3 | Shell_0314 | Shell_0316 | TIGRFAM: riboflavin synthase; KEGG: bba:Bd3037 riboflavin synthase beta chain; PFAM: 67-dimethyl-8-ribityllumazine synthase. | GTP cyclohydrolase IIa; Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity; Belongs to the archaeal-type GTP cyclohydrolase family. | 0.695 |
ADI31469.1 | ADI32376.1 | Shell_0337 | Shell_1281 | Metallopeptidase-like protein. | SMART: AAA ATPase; KEGG: dps:DP1919 hypothetical protein. | 0.529 |
ADI32138.1 | ADI31435.1 | Shell_1034 | Shell_0302 | SMART: von Willebrand factor type A; KEGG: ade:Adeh_3265 VWA containing CoxE-like. | KEGG: noc:Noc_2211 transposase IS605; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB. | 0.469 |
ADI32138.1 | ADI31447.1 | Shell_1034 | Shell_0314 | SMART: von Willebrand factor type A; KEGG: ade:Adeh_3265 VWA containing CoxE-like. | TIGRFAM: riboflavin synthase; KEGG: bba:Bd3037 riboflavin synthase beta chain; PFAM: 67-dimethyl-8-ribityllumazine synthase. | 0.506 |
ADI32138.1 | ADI32376.1 | Shell_1034 | Shell_1281 | SMART: von Willebrand factor type A; KEGG: ade:Adeh_3265 VWA containing CoxE-like. | SMART: AAA ATPase; KEGG: dps:DP1919 hypothetical protein. | 0.590 |
ADI32372.1 | ADI32373.1 | Shell_1277 | Shell_1278 | Hypothetical protein. | Hypothetical protein. | 0.644 |
ADI32372.1 | ADI32374.1 | Shell_1277 | Shell_1279 | Hypothetical protein. | Hypothetical protein. | 0.644 |
ADI32372.1 | ADI32375.1 | Shell_1277 | Shell_1280 | Hypothetical protein. | PFAM: NurA domain. | 0.511 |
ADI32372.1 | ADI32376.1 | Shell_1277 | Shell_1281 | Hypothetical protein. | SMART: AAA ATPase; KEGG: dps:DP1919 hypothetical protein. | 0.466 |
ADI32373.1 | ADI32372.1 | Shell_1278 | Shell_1277 | Hypothetical protein. | Hypothetical protein. | 0.644 |
ADI32373.1 | ADI32374.1 | Shell_1278 | Shell_1279 | Hypothetical protein. | Hypothetical protein. | 0.782 |
ADI32373.1 | ADI32375.1 | Shell_1278 | Shell_1280 | Hypothetical protein. | PFAM: NurA domain. | 0.561 |
ADI32373.1 | ADI32376.1 | Shell_1278 | Shell_1281 | Hypothetical protein. | SMART: AAA ATPase; KEGG: dps:DP1919 hypothetical protein. | 0.505 |
ADI32374.1 | ADI32372.1 | Shell_1279 | Shell_1277 | Hypothetical protein. | Hypothetical protein. | 0.644 |
ADI32374.1 | ADI32373.1 | Shell_1279 | Shell_1278 | Hypothetical protein. | Hypothetical protein. | 0.782 |
ADI32374.1 | ADI32375.1 | Shell_1279 | Shell_1280 | Hypothetical protein. | PFAM: NurA domain. | 0.561 |
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