node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
infB | rpl1 | Shell_1638 | Shell_1382 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | 0.959 |
infB | rpl10 | Shell_1638 | Shell_1381 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.946 |
infB | rpl12 | Shell_1638 | Shell_1380 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | Ribosomal protein 60S; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.999 |
infB | rpl13e | Shell_1638 | Shell_0657 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | Rpl13; K02873 large subunit ribosomal protein L13e; KEGG: rpl13; ribosomal protein L13; K02873 large subunit ribosomal protein L13e; Belongs to the eukaryotic ribosomal protein eL13 family. | 0.781 |
infB | rpl18 | Shell_1638 | Shell_1425 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.971 |
infB | rpl19e | Shell_1638 | Shell_1426 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.818 |
infB | rpl21e | Shell_1638 | Shell_0022 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | PFAM: Ribosomal protein L21e; KEGG: hypothetical protein; K02889 large subunit ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.819 |
infB | rpl30 | Shell_1638 | Shell_1423 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | KEGG: 60S RIBOSOMAL PROTEIN L7; K02937 large subunit ribosomal protein L7e; TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30. | 0.954 |
infB | rpl31e | Shell_1638 | Shell_1390 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | KEGG: Ribosomal protein L31B; K02910 large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.826 |
infB | tuf | Shell_1638 | Shell_1657 | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | Translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.597 |
rpl1 | infB | Shell_1382 | Shell_1638 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.959 |
rpl1 | rpl10 | Shell_1382 | Shell_1381 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rpl1 | rpl12 | Shell_1382 | Shell_1380 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | Ribosomal protein 60S; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.997 |
rpl1 | rpl13e | Shell_1382 | Shell_0657 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | Rpl13; K02873 large subunit ribosomal protein L13e; KEGG: rpl13; ribosomal protein L13; K02873 large subunit ribosomal protein L13e; Belongs to the eukaryotic ribosomal protein eL13 family. | 0.999 |
rpl1 | rpl18 | Shell_1382 | Shell_1425 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rpl1 | rpl19e | Shell_1382 | Shell_1426 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.999 |
rpl1 | rpl21e | Shell_1382 | Shell_0022 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | PFAM: Ribosomal protein L21e; KEGG: hypothetical protein; K02889 large subunit ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.999 |
rpl1 | rpl30 | Shell_1382 | Shell_1423 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | KEGG: 60S RIBOSOMAL PROTEIN L7; K02937 large subunit ribosomal protein L7e; TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30. | 0.999 |
rpl1 | rpl31e | Shell_1382 | Shell_1390 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | KEGG: Ribosomal protein L31B; K02910 large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.999 |
rpl1 | tuf | Shell_1382 | Shell_1657 | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | Translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.837 |