STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI32483.1PFAM: protein of unknown function UPF0044; KEGG: ppd:Ppro_1188 hypothetical protein. (122 aa)    
Predicted Functional Partners:
rps19e
Ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
       0.870
rnp4
RNAse P, Rpr2/Rpp21 subunit; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
       0.866
ADI32481.1
PFAM: DNA-binding TFAR19-related protein; KEGG: hypothetical protein; K06875; Belongs to the PDCD5 family.
       0.857
rpl39e
PFAM: Ribosomal protein L39e; KEGG: 60S ribosomal protein L39; K02924 large subunit ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family.
       0.826
rpl31e
KEGG: Ribosomal protein L31B; K02910 large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family.
       0.723
nep1
Suppressor Mra1 family protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA.
       0.616
eif6
Translation initiation factor eIF-6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.
       0.574
rpl18a
PFAM: Ribosomal LX protein.
       0.572
spt5
NusG antitermination factor; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
  
  
 0.540
ADI32476.1
Prefoldin, alpha subunit; KEGG: AGAP003416-PA; K04797 prefoldin alpha subunit; TIGRFAM: prefoldin, alpha subunit; PFAM: Prefoldin alpha domain protein.
       0.538
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.