STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI32543.1DEAD/DEAH box helicase domain protein; KEGG: mxa:MXAN_0997 putative ATP_dependent helicase Lhr; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; DEAD/H associated domain protein; SMART: DEAD-like helicase; helicase domain protein. (933 aa)    
Predicted Functional Partners:
ADI32544.1
Protein of unknown function DUF87; KEGG: eck:EC55989_4834 hypothetical protein; PFAM: protein of unknown function DUF87; SMART: AAA ATPase.
       0.598
ADI32545.1
KEGG: hypothetical protein.
       0.572
ADI31840.1
KEGG: yprA. Lhr1/Ski2 family RNA SFII helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
  
     0.512
lig
DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
 
    0.486
ADI32225.1
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_6076 metallophosphoesterase.
 
    0.465
ADI32591.1
KEGG: mxa:MXAN_6101 putative helicase, ATP-dependent; PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
 
 
   0.413
ADI31320.1
KEGG: wol:WD0887 DNA repair protein RadA.
  
 
 0.405
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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