STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI32673.1PFAM: Oligosaccharide biosynthesis protein Alg14 like. (326 aa)    
Predicted Functional Partners:
ADI32672.1
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: vfi:VF_1458 threonine synthase.
     
 0.761
ADI31768.1
UDP-N-acetylglucosamine--dolichyl-phosphateN- acetylglucosaminephosphotransferase; KEGG: N-acetylglucosamine-1-phosphate transferase; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphstransferase; PFAM: Glycosyl transferase, family 4, conserved region.
  
  
 0.755
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.484
ADI31289.1
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: shl:Shal_3361 putative monovalent cation/H+ antiporter subunit D.
   
   0.475
uppS
Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
  
  
 0.456
ADI32674.1
Hypothetical protein; KEGG: sew:SeSA_A0723 O-antigen conversion protein.
       0.447
hisS
TIGRFAM: histidyl-tRNA synthetase; KEGG: rak:A1C_02295 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.415
ADI32456.1
TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; KEGG: SORBIDRAFT_06g017040; hypothetical protein; SMART: Elongator protein 3/MiaB/NifB.
     
 0.404
Your Current Organism:
Staphylothermus hellenicus
NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8
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