Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEV24255.1 | EEV24771.1 | AM202_04826 | AM202_01065 | HCP oxidoreductase, NADH-dependent; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | COG0225 Peptide methionine sulfoxide reductase. | 0.539 |
EEV24255.1 | arsC | AM202_04826 | AM202_0003 | HCP oxidoreductase, NADH-dependent; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Arsenate reductase. | 0.468 |
EEV24278.1 | EEV24771.1 | AM202_04950 | AM202_01065 | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | COG0225 Peptide methionine sulfoxide reductase. | 0.496 |
EEV24278.1 | arsC | AM202_04950 | AM202_0003 | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | Arsenate reductase. | 0.601 |
EEV24278.1 | rpoA | AM202_04950 | AM202_0619 | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | DNA-directed RNA polymerase subunit alpha. | 0.972 |
EEV24278.1 | rpoB | AM202_04950 | AM202_0411 | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | DNA-directed RNA polymerase subunit beta. | 0.976 |
EEV24278.1 | rpoC | AM202_04950 | AM202_0412 | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | DNA-directed RNA polymerase subunit beta'. | 0.966 |
EEV24278.1 | rpoH | AM202_04950 | AM202_0255 | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | RNA polymerase sigma-32 factor. | 0.446 |
EEV24278.1 | rpoZ | AM202_04950 | AM202_02130 | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | COG1758 DNA-directed RNA polymerase, subunit K/omega. | 0.955 |
EEV24771.1 | EEV24255.1 | AM202_01065 | AM202_04826 | COG0225 Peptide methionine sulfoxide reductase. | HCP oxidoreductase, NADH-dependent; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.539 |
EEV24771.1 | EEV24278.1 | AM202_01065 | AM202_04950 | COG0225 Peptide methionine sulfoxide reductase. | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | 0.496 |
EEV24771.1 | arsC | AM202_01065 | AM202_0003 | COG0225 Peptide methionine sulfoxide reductase. | Arsenate reductase. | 0.511 |
EEV24771.1 | rpoB | AM202_01065 | AM202_0411 | COG0225 Peptide methionine sulfoxide reductase. | DNA-directed RNA polymerase subunit beta. | 0.999 |
EEV24771.1 | rpoC | AM202_01065 | AM202_0412 | COG0225 Peptide methionine sulfoxide reductase. | DNA-directed RNA polymerase subunit beta'. | 0.423 |
EEV24771.1 | rpoH | AM202_01065 | AM202_0255 | COG0225 Peptide methionine sulfoxide reductase. | RNA polymerase sigma-32 factor. | 0.496 |
acr3 | arsC | AM202_0002 | AM202_0003 | Arsenite efflux pump ACR3. | Arsenate reductase. | 0.819 |
acr3 | arsR | AM202_0002 | AM202_0004 | Arsenite efflux pump ACR3. | Putative transcriptional regulator. | 0.845 |
arsC | EEV24255.1 | AM202_0003 | AM202_04826 | Arsenate reductase. | HCP oxidoreductase, NADH-dependent; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.468 |
arsC | EEV24278.1 | AM202_0003 | AM202_04950 | Arsenate reductase. | COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). | 0.601 |
arsC | EEV24771.1 | AM202_0003 | AM202_01065 | Arsenate reductase. | COG0225 Peptide methionine sulfoxide reductase. | 0.511 |
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